PP_0079E4M.1

USA/PP_0079E4M.1/2026-06-26
R. Sainsbury

Utah Public Health Laboratory Infectious Disease submission group, Utah Public Health Laboratory

Sample details

Collection date
2026-06-26
Sampling location
USA (Arizona)
Isolate name
MVs/Arizona.USA/26.26/UT-UPHL-260710593599 [D8]

Data use terms

Data use terms
OPEN
Data use terms URL

Genotype

Genotype
D8

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-22
NCBI update date
2026-07-22
Raw reads accession

Host

Host

Submission details

Submission ID
PZ706651.1
Submitting group
Date submitted
2026-07-23 04:00:30 UTC
Date released
2026-07-23 04:01:07 UTC
Earliest release date
2026-07-22

Alignment and QC

Length
15087 (52.9%)
# of SNPs
255
# of unknown bases
6678

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions
  • T791C
  • G809C
  • T860C
  • T881C
  • T926C
  • C1043T
  • A1055G
  • G1076A
  • C1101T
  • C1103A
  • C1145T
  • A1151G
  • A1229G
  • C1253T
  • T1324C
  • G1334A
  • C1337T
  • C1352T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

C

  • C:D5G
  • C:K78R
  • C:G181V

F

  • F:A9V
  • F:F11V
  • F:H419R
  • F:K469T

H

  • H:R175K
  • H:G235E
  • H:G243E
  • H:A267I
  • H:R334Q
  • H:N390I
  • H:A400T
  • H:V412L
  • H:N416D

L

  • L:D1037G
  • L:R1044G
  • L:V1343I
  • L:S1356P
  • L:V1705I
  • L:I1710F
  • L:S1711P
  • L:S1745N
  • L:V2096I
  • L:V2130I
  • L:K2162R

M

  • M:A19T

N

  • N:I406T
  • N:K441R
  • N:G443S
  • N:E446G
  • N:Y451N
  • N:S457I
  • N:A459L
  • N:P467L
  • N:M471T
  • N:E480G
  • N:R497K
  • N:G509S

P

  • P:E54K
  • P:T92A
  • P:K195R
  • P:S219G
  • P:A269V
  • P:G270E
  • P:V276A
  • P:I282T
  • P:K350R
  • P:R355K
  • P:V414A
  • P:V446M
  • P:A459V

V

  • V:E54K
  • V:T92A
  • V:K195R
  • V:S219G
  • V:G237S
Deletions
N/A
Insertions
N/A

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