PP_0079ANN.1

USA/RSV-20260706-004/2026-05-12
K. Smith, J. Martinez, C. Wright, H. Yu, B. Bertrand, A. Ramaiah & E. Kersh

GPHL, Bacteriology

Sample details

Collection date
2026-05-12
Sampling location
USA (Georgia)
Isolate name
RSV-20260706-004

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-21
NCBI update date
2026-07-21
Raw reads accession

Host

Host

Submission details

Submission ID
PZ668849.1
Submitting group
Date submitted
2026-07-22 05:32:09 UTC
Date released
2026-07-22 05:32:58 UTC
Earliest release date
2026-07-21

Alignment and QC

Length
15179 (98.5%)
# of SNPs
149
# of inserted bases
4
# of deleted bases
3
# of ambiguous bases
1
# of unknown bases
176

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A276G
  • G513T
  • G579A
  • C628T
  • C998A
  • T1192C
  • T1333C
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • T2346C
  • T2355C
  • T2406C
  • T2430C
  • T2490C
  • C2554T
Deletions
973, 3105, 4586
Insertions
ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:I119L
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H

L

  • L:N478S
  • L:K570R
  • L:N590S
  • L:V1721A
  • L:R1759K
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS1

  • NS1:K74E
Deletions
N/A
Insertions
N/A

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