PP_0079AJW.1

USA/RSV-20260706-019/2026-04-12
K. Smith, J. Martinez, C. Wright, H. Yu, B. Bertrand, A. Ramaiah & E. Kersh

GPHL, Bacteriology

Sample details

Collection date
2026-04-12
Sampling location
USA (Georgia)
Isolate name
RSV-20260706-019

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-21
NCBI update date
2026-07-21
Raw reads accession

Host

Host

Submission details

Submission ID
PZ668840.1
Submitting group
Date submitted
2026-07-22 05:32:09 UTC
Date released
2026-07-22 05:32:58 UTC
Earliest release date
2026-07-21

Alignment and QC

Length
15176 (99.4%)
# of SNPs
155
# of inserted bases
3
# of deleted bases
2
# of unknown bases
46

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • G513T
  • G579A
  • A665G
  • G787A
  • C998A
  • G1138A
  • A1267T
  • G1385A
  • T1470C
  • T1720C
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2260T
  • T2457C
  • C2554T
  • C2691T
Deletions
973, 4507
Insertions
ins_15088:TAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389P
  • F:A543T

G

  • G:A47T
  • G:A74V
  • G:S100G
  • G:P110L
  • G:T131A
  • G:I137T
  • G:K199N
  • G:L217P
  • G:P221L
  • G:P229L
  • G:D251N
  • G:I252T
  • G:K256N
  • G:I268T
  • G:A269T
  • G:S275P
  • G:Y285H
  • G:P289S

L

  • L:D174N
  • L:I445V
  • L:K570R
  • L:P1720S
  • L:S1734N
  • L:T1744A
  • L:R1759K
  • L:T1794I
  • L:I1849V
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
  • N:V125A

NS2

  • NS2:T28A
Deletions
N/A
Insertions
N/A

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