PP_00797MT.1

USA/RSV-20260706-001/2026-05-02
K. Smith, J. Martinez, C. Wright, H. Yu, B. Bertrand, A. Ramaiah & E. Kersh

GPHL, Bacteriology

Sample details

Collection date
2026-05-02
Sampling location
USA (Georgia)
Isolate name
RSV-20260706-001

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.1.6

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-21
NCBI update date
2026-07-21
Raw reads accession

Host

Host

Submission details

Submission ID
PZ668847.1
Submitting group
Date submitted
2026-07-22 05:02:20 UTC
Date released
2026-07-22 05:02:37 UTC
Earliest release date
2026-07-21

Alignment and QC

Length
15085 (98.8%)
# of SNPs
247
# of deleted bases
3
# of unknown bases
42

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • A67G
  • C90T
  • C183T
  • G198A
  • G286A
  • A303T
  • C360T
  • A399G
  • T497C
  • G551A
  • G555A
  • G664A
  • T697C
  • G747A
  • T781C
  • T832C
  • G1000A
  • C1012T
Deletions
4175, 4591, 4592
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

G

  • G:P71L
  • G:N81D
  • G:H90Y
  • G:L101F
  • G:G106E
  • G:P120L
  • G:S121I
  • G:I134K
  • G:L142S
  • G:P143S
  • G:P217S
  • G:G224E
  • G:N242T
  • G:S243I
  • G:K262E
  • G:I265L
  • G:D284G
  • G:G296S

L

  • L:N143D
  • L:P171L
  • L:N236S
  • L:R256K
  • L:Y598H
  • L:M1225I
  • L:L1438Q
  • L:I1653V
  • L:K1661N
  • L:H1690Y
  • L:H1707Q
  • L:N1719Y
  • L:N1723S
  • L:N1724D
  • L:E1725G
  • L:G1731D
  • L:M2104I
  • L:Y2163N

M

  • M:M43I

M2-1

  • M2-1:I87V
  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N

N

  • N:V352A

NS1

  • NS1:V73M

NS2

  • NS2:R50K

P

  • P:L55P

SH

  • SH:I38S
Deletions
N/A
Insertions
N/A

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