PP_0078TVT.1

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Argentina/PP_0078TVT.1/2023

D. Alonso, S. Kehl, C. Bellomo & V. Martinez

Instituto Nacional de Enfermedades Infecciosas (ANLIS Malbran), Virology

Sample details

Collection date

2023

Sampling location

Argentina (Neuquen)

Isolate name

ARNQ1883

Data use terms

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

INSDC

INSDC accession L

PZ424457.1

INSDC accession M

PZ424456.1

INSDC accession S

PZ424455.1

NCBI release date

2026-07-16

Host

human (Homo sapiens)

Submission details

Submission ID

PZ424457.1.L/PZ424456.1.M/PZ424455.1.S

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-07-17 07:00:17 UTC

Date released

2026-07-17 07:01:00 UTC

Earliest release date

2026-07-16

Alignment and QC

Length M

3630 (98.9%)

# of SNPs M

253

Length S

1825 (97.4%)

# of SNPs S

127

# of inserted bases S

# of deleted bases S

Length L

6478 (98.6%)

# of SNPs L

414

# of ambiguous bases L

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

T47C
C74T
C131T
C146T
G149A
C155T
A200G
A206T
C219T
G221A
C254T
G263A
T269C
A296G
A302G
C305T
T308C
C311T

M

A49G
T66C
T74C
G114A
C159T
T168C
C171T
T177C
C180T
A186G
C190T
G198A
C231T
T246C
T252C
G271A
G276A
C315T

S

G63A
G66A
G120A
A135G
A219G
T225C
T244C
T306C
A312G
G315A
T357C
T363C
G378A
C417T
G425T
C444A
G450A
T454C

Deletions

S

1443, 1573

Insertions

S

ins_1555:A, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references