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PP_0078TSZ.1
Download
Download FASTA
Download metadata TSV
Argentina/PP_0078TSZ.1/2024
D. Alonso,
S. Kehl,
C. Bellomo &
V. Martinez
Instituto Nacional de Enfermedades Infecciosas (ANLIS Malbran), Virology
Sample details
Collection date
2024
Sampling location
Argentina (Neuquen)
Isolate name
ARNQ1945
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession L
PZ412315.1
INSDC accession M
PZ412314.1
INSDC accession S
PZ412313.1
NCBI release date
2026-07-16
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PZ412315.1.L/PZ412314.1.M/PZ412313.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-07-17 07:00:17 UTC
Date released
2026-07-17 07:01:00 UTC
Earliest release date
2026-07-16
Alignment and QC
Length L
6482 (98.8%)
# of SNPs L
390
Length S
1831 (97.7%)
# of SNPs S
121
# of inserted bases S
5
# of deleted bases S
2
Length M
3652 (99.2%)
# of SNPs M
209
# of inserted bases M
8
# of unknown bases M
2
Nucleotide mutations
Mutations called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
L
T
47
C
A
50
G
C
74
T
C
131
T
C
146
T
C
147
T
G
149
A
C
155
T
C
173
T
T
182
C
T
215
C
A
218
G
A
233
C
T
278
C
A
296
G
T
297
C
A
302
G
T
326
C
Show more
M
G
45
A
T
74
C
T
90
C
G
114
A
C
147
T
C
174
T
C
190
T
A
192
G
C
231
T
C
243
T
T
255
C
A
264
G
C
285
T
T
312
C
C
315
T
G
339
C
T
345
C
A
360
G
Show more
S
G
63
A
G
66
A
G
120
A
G
129
A
A
135
G
T
202
C
A
219
G
T
225
C
T
244
C
T
306
C
A
312
G
G
315
A
A
318
G
T
354
G
G
378
A
C
417
T
C
444
A
G
450
A
Show more
Deletions
S
1443, 1573
Insertions
M
ins_3497:NNNNNNTG
S
ins_1555:A, ins_1631:TTT, ins_1668:T
Amino acid substitutions
Substitutions called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
GPC
GPC:
V
8
A
GPC:
I
114
V
GPC:
H
294
Y
GPC:
V
346
I
GPC:
T
353
V
GPC:
I
361
V
GPC:
V
435
I
GPC:
V
957
I
GPC:
T
1023
A
GPC:
S
1055
T
GPC:
V
1127
I
Gc
Gc:
V
306
I
Gc:
T
372
A
Gc:
S
404
T
Gc:
V
476
I
Gn
Gn:
V
8
A
Gn:
I
114
V
Gn:
H
294
Y
Gn:
V
346
I
Gn:
T
353
V
Gn:
I
361
V
Gn:
V
435
I
NSs
NSs:
R
3
K
NSs:
Q
5
R
NSs:
E
33
G
NSs:
L
35
S
NSs:
I
62
T
RdRp
RdRp:
T
141
I
RdRp:
R
144
K
RdRp:
V
161
I
RdRp:
L
277
S
RdRp:
S
338
A
RdRp:
R
346
K
RdRp:
I
402
V
RdRp:
A
541
V
RdRp:
D
780
N
RdRp:
N
1033
D
RdRp:
D
1303
E
RdRp:
V
1665
I
RdRp:
K
1750
R
RdRp:
T
2113
A
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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