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PP_0078TR1.1
Download
Download FASTA
Download metadata TSV
Argentina/PP_0078TR1.1/2025
D. Alonso,
S. Kehl,
C. Bellomo &
V. Martinez
Instituto Nacional de Enfermedades Infecciosas (ANLIS Malbran), Virology
Sample details
Collection date
2025
Sampling location
Argentina (Neuquen)
Isolate name
ARNQ2007
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession L
PZ412310.1
INSDC accession M
PZ412309.1
INSDC accession S
PZ412308.1
NCBI release date
2026-07-16
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PZ412310.1.L/PZ412309.1.M/PZ412308.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-07-17 07:00:17 UTC
Date released
2026-07-17 07:01:00 UTC
Earliest release date
2026-07-16
Alignment and QC
Length L
4351 (66.3%)
# of SNPs L
266
Length M
3489 (95%)
# of SNPs M
204
Length S
1774 (94.5%)
# of SNPs S
124
# of inserted bases S
7
# of deleted bases S
2
Nucleotide mutations
Mutations called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
L
C
74
T
C
131
T
C
146
T
C
147
T
G
149
A
C
155
T
C
173
T
T
182
C
T
215
C
A
218
G
A
233
C
A
243
G
T
278
C
A
296
G
T
297
C
A
302
G
T
326
C
T
329
C
Show more
M
G
45
A
T
74
C
T
90
C
G
114
A
C
147
T
C
174
T
C
190
T
A
192
G
C
231
T
C
243
T
A
264
G
T
312
C
C
315
T
G
339
C
T
345
C
A
360
G
T
363
C
T
372
C
Show more
S
G
63
A
G
66
A
G
120
A
A
135
G
T
202
C
A
219
G
T
225
C
T
244
C
T
306
C
A
312
G
G
315
A
A
318
G
T
354
G
G
378
A
C
417
T
C
444
A
G
450
A
T
454
C
Show more
Deletions
S
1443, 1573
Insertions
S
ins_1482:CC, ins_1555:A, ins_1631:TTT, ins_1668:T
Amino acid substitutions
Substitutions called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
GPC
GPC:
V
8
A
GPC:
I
114
V
GPC:
A
193
T
GPC:
H
294
Y
GPC:
V
346
I
GPC:
T
353
V
GPC:
I
537
V
GPC:
T
1023
A
GPC:
N
1024
T
GPC:
S
1055
T
GPC:
V
1127
I
Gc
Gc:
T
372
A
Gc:
N
373
T
Gc:
S
404
T
Gc:
V
476
I
Gn
Gn:
V
8
A
Gn:
I
114
V
Gn:
A
193
T
Gn:
H
294
Y
Gn:
V
346
I
Gn:
T
353
V
Gn:
I
537
V
NSs
NSs:
Q
5
R
NSs:
E
33
G
NSs:
L
35
S
NSs:
I
62
T
RdRp
RdRp:
I
70
V
RdRp:
T
141
I
RdRp:
R
144
K
RdRp:
L
277
S
RdRp:
S
338
A
RdRp:
R
346
K
RdRp:
I
402
V
RdRp:
A
541
M
RdRp:
D
780
N
RdRp:
N
1033
D
RdRp:
D
1303
E
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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