PP_0078QGP.1

Peru/PP_0078QGP.1/2025-06-05
E. Meza, D. Cuicapuza, A. Martinez, B. Ayzanoa, J. Huancachoque, T. Cubas, F. Caballero, D. Bacsik, C. Zamudio & P. Tsukayama

Universidad Peruana Cayetano Heredia, Laboratorio de Genomica Microbiana

Sample details

Collection date
2025-06-05
Sampling location
Peru (Lima)
Isolate name
hRSV/A/Peru/LIM-UPCH-5050/2025

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.3.3

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-14
NCBI update date
2026-07-14

Host

Host

Submission details

Submission ID
PZ645703.1
Submitting group
Date submitted
2026-07-15 12:02:18 UTC
Date released
2026-07-15 12:03:17 UTC
Earliest release date
2026-07-14

Alignment and QC

Length
15166 (99.6%)
# of SNPs
217
# of inserted bases
1
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T59C
  • T66A
  • A67G
  • G73A
  • G74A
  • C90T
  • C183T
  • A354G
  • G587T
  • C1012T
  • G1034A
  • G1050A
  • G1075A
  • G1077A
  • T1137C
  • T1218C
  • T1326C
  • T1359C
Deletions
4592
Insertions
ins_3154:A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:K68E

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:K204N
  • G:G224E
  • G:P234S
  • G:S243I
  • G:N255D
  • G:H258Q
  • G:K262E
  • G:T264I
  • G:I265L
  • G:H266L
  • G:T268I

L

  • L:P171L
  • L:T184A
  • L:R256K
  • L:L323I
  • L:Y598H
  • L:M824I
  • L:L835M
  • L:I1114V
  • L:I1191V
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:N1737K

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:H45Y
  • M2-2:D65E
  • M2-2:T77A

N

  • N:V352A

NS1

  • NS1:G2N

P

  • P:L55P
  • P:T92M
Deletions
N/A
Insertions
N/A

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