PP_0073EAM.1

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Kazakhstan/PP_0073EAM.1/2025

K. T. Maikhin, M. A. Berdikulov, G. K. Mussayeva, T. Karibayev, S. Zhussambayeva, S. K. Samarkhanov, B. Koigeldinova, K. Kalkabayev, B. Momynov, A. Kuanyshbek, A. Shevtsov, D. Kamalova & K. Botagoz

National Center for Biotechnology, Laboratory of Applied Genetics

Sample details

Collection date

2025

Sampling location

Kazakhstan (Turkestan Region, Otyr District, Karakonyr Village)

Isolate name

CCHV-2025/5

Data use terms

Changed	User	Data use terms
2026-06-15 07:31	insdc_ingest_user	OPEN

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

Lineage

Segment S Lineage

IV.2

INSDC

INSDC accession S

PZ269562.1

NCBI release date

2026-06-14

Submission details

Submission ID

PZ269562.1.S

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-06-15 07:31:42 UTC

Date released

2026-06-15 07:32:40 UTC

Earliest release date

2026-06-14

Alignment and QC

Length S

420 (25.3%)

# of SNPs S

# of deleted bases S

# of frame shifts S

Frame shifts S

NP:167-171(nt:552-568)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

T220C
G229A
C235T
C241T
A247G
T250A
G262A
A268C
G271A
T277C
T283C
T289C
C295T
A298C
A322G
A325G
T334G
A337G

Deletions

S

551, 569, 570

Insertions

N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references