PP_0073BVK.1

USA/PP_0073BVK.1/2026-04-23
J. Garfin, M. Plumb, K. Pung, A. Mondelli, B. Weber, H. D. Kunerth, D. Evans, L. Bohnker-Voels, M. Anacker, J. Jencks & S. Namugenyi

Minnesota Department of Health Infectious Disease Laboratory Submission Group, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-04-23
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04748

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-14 05:32insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-06-13
NCBI update date
2026-06-13
Raw reads accession

Host

Host

Submission details

Submission ID
PZ465865.1
Submitting group
Date submitted
2026-06-14 05:32:12 UTC
Date released
2026-06-14 05:32:45 UTC
Earliest release date
2026-06-13

Alignment and QC

Length
14874 (92.5%)
# of SNPs
157
# of inserted bases
9
# of deleted bases
2
# of unknown bases
789

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G513T
  • G579A
  • A595T
  • C610T
  • C688T
  • T808C
  • C829A
  • T835C
  • G955A
  • C998A
  • G1385A
  • T1474C
  • G1651A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • A2200G
Deletions

973, 4586
Insertions

ins_3200:GAAAGAA, ins_15092:AT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:Y21C
  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:S307P
  • G:*311Q

L

  • L:I393V
  • L:K570R
  • L:R1759K
  • L:V1965I
  • L:T1987I
  • L:I2087V

M

  • M:T89I
  • M:V122I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

P

  • P:P34L
Deletions
N/A
Insertions
N/A

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