PP_0073AQW.1

USA/PP_0073AQW.1/2026-04-04
K. Smith, J. Martinez, H. Yu, B. Bertrand, M. Heck, A. Ramaiah & E. Kersh

GPHL, Bacteriology

Sample details

Collection date
2026-04-04
Sampling location
USA (Georgia)
Isolate name
RSV-20260601-021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-14 05:02insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.3

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-06-13
NCBI update date
2026-06-13
Raw reads accession

Host

Host

Submission details

Submission ID
PZ495646.1
Submitting group
Date submitted
2026-06-14 05:02:26 UTC
Date released
2026-06-14 05:03:25 UTC
Earliest release date
2026-06-13

Alignment and QC

Length
15092 (99%)
# of SNPs
225
# of inserted bases
3
# of deleted bases
1
# of unknown bases
11

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • A67G
  • C90T
  • C183T
  • C228T
  • C411T
  • T508C
  • C511T
  • G587T
  • C611A
  • A630G
  • T667C
  • T733C
  • A992G
  • T1004C
  • C1012T
  • T1032C
  • G1034A
  • G1050A
Deletions

4592
Insertions

ins_3154:A, ins_15115:TT

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:E2D
  • F:T12I
  • F:L15F

G

  • G:V69A
  • G:P71L
  • G:H90Y
  • G:L101I
  • G:T113I
  • G:V131D
  • G:I134K
  • G:R151H
  • G:N178G
  • G:P206L
  • G:G224E
  • G:V225A
  • G:K233E
  • G:S243I
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L

L

  • L:I71M
  • L:I81L
  • L:P171L
  • L:R256K
  • L:K259R
  • L:I393V
  • L:S560L
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:D1644E
  • L:N1723S
  • L:N1724D
  • L:E1725G
  • L:G1731D
  • L:N1737T
  • L:V1864I

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:Y149H
  • N:Y216H
  • N:V352A

NS2

  • NS2:H5N
  • NS2:Q11R

P

  • P:L55P
  • P:T92M
Deletions
N/A
Insertions
N/A

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