PP_00732N8.1

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Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.

Spain/PP_00732N8.1/2026-05-25

A. Negredo, A. Vázquez, A. Potente, E. Ruiz de Pedro, P. Jiménez & M. P. SánchezSeco

Sample details

Collection date

2026-05-25

Sampling location

Spain

Data use terms

Changed	User	Data use terms
2026-06-11 20:01	pazsanchezseco	RESTRICTED until 2027-06-11

RESTRICTED

Data use terms URL

https://pathoplexus.org/about/terms-of-use/restricted-data

Submission details

Submission ID

AND_SP_13_854_250526

Submitting group

ANDES SPAIN

Date submitted

2026-06-11 20:01:04 UTC

Date released

2026-06-11 20:02:02 UTC

Earliest release date

2026-06-11

Alignment and QC

Length M

3641 (99.2%)

# of SNPs M

209

Length S

1844 (98.3%)

# of SNPs S

127

# of inserted bases S

# of deleted bases S

Length L

6538 (99.6%)

# of SNPs L

388

# of inserted bases L

# of deleted bases L

# of frame shifts L

Frame shifts L

RdRp:590-1388(nt:1802-4198)

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

T47C
G62A
T68G
C74T
C131T
C146T
C147T
G149A
C155T
C173T
T182C
T215C
A218G
A233C
T278C
A296G
T297C
A302G

M

G45A
T74C
T90C
G114A
C147T
C174T
C190T
A192G
C231T
C243T
A264G
T312C
C315T
G339C
T345C
A360G
T363C
A381G

S

G63A
G66A
G120A
A135G
T202C
A219G
T225C
T244C
T306C
G315A
A318G
C328T
C417T
C444A
G450A
T454C
C459T
G465A

Deletions

L

4199

S

1443, 1573

Insertions

L

ins_1801:C

S

ins_1486:T, ins_1555:A, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references