PP_0072KY7.1

Download

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.

DENV-1/Brazil/ITpS_C5K_001Q0_001/2026-02-18

A. B. Muniz, D. Silva, M. Mejía, V. Nascimento, V. Souza & F. Naveca

Instituto Leônidas e Maria Deane - Fiocruz AM

Sample details

Collection date

2026-02-18

Sampling location

Brazil (Amazonas)

City

Eirunepé

Data use terms

Changed	User	Data use terms
2026-06-08 19:17	bachaves	RESTRICTED until 2027-06-08

RESTRICTED

Data use terms URL

https://pathoplexus.org/about/terms-of-use/restricted-data

Lineage & Serotype

Lineage

1V_D.1.1

Serotype

DENV-1

Host

human (Homo sapiens)

Sequencing

Sequencing instrument

Illumina NextSeq 1000

Depth of coverage

1512

Submission details

Submission ID

ITpS_C5K_001Q0_001

Submitting group

Genomica para vigilancia oportuna de patogenos (Gevop)

Date submitted

2026-06-08 19:17:47 UTC

Date released

2026-06-08 19:18:20 UTC

Earliest release date

2026-06-08

Alignment and QC

Length

10633 (99%)

# of SNPs

854

# of inserted bases

# of ambiguous bases

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

T171G
T244C
C253T
T274C
A286G
T289C
G302A
C346T
G349A
A355G
A363G
T397C
C429T
C443T
C451A
G466A
C481T
A499G

Deletions

N/A

Insertions

ins_10642:G

Amino acid substitutions

Substitutions called relative to the NC_001477.1 reference