PP_0070URG.1

USA/PP_0070URG.1/2026-04-06
J. Garfin, M. Plumb, K. Pung, A. Mondelli, B. Weber, H. D. Kunerth, D. Evans, L. Bohnker-Voels, M. Anacker, J. Jencks & S. Namugenyi

Minnesota Department of Health Infectious Disease Laboratory Submission Group, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-04-06
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04667

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-27 12:32insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-05-26
NCBI update date
2026-05-26
Raw reads accession

Host

Host

Submission details

Submission ID
PZ414323.1
Submitting group
Date submitted
2026-05-27 12:32:53 UTC
Date released
2026-05-27 12:33:06 UTC
Earliest release date
2026-05-26

Alignment and QC

Length
15142 (90.2%)
# of SNPs
147
# of inserted bases
7
# of deleted bases
3
# of unknown bases
1409

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A134G
  • C413T
  • G513T
  • G579A
  • A597C
  • C688T
  • C766T
  • T871C
  • C998A
  • A1132G
  • G1385A
  • A1402G
  • G1732A
  • T1846C
  • C2074T
  • T2107C
  • C2198T
  • C2248T
Deletions

973, 3201, 4586
Insertions

ins_5335:ACA, ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:S130I
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P140S
  • G:P214S
  • G:L217P
  • G:P221L
  • G:I252T
  • G:S255P
  • G:K256N
  • G:S265P
  • G:I268T
  • G:L270F
  • G:S275P
  • G:Y285H

L

  • L:K570R
  • L:V1965I
  • L:A1972T
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS2

  • NS2:N5T

P

  • P:D225N
Deletions
N/A
Insertions

G

ins_G:230:T

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