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PP_006XV6S.1
Download
Download FASTA
Download metadata TSV
Restricted-Use sequence
This sequence is only available under the
Restricted Use Terms
. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
YFV/Gambia/AR_24_427/2024-11-26
Idrissa Dieng,
Sheriffo Jagne,
Modou Lamin Sanneh,
Leon Mignane Ndiaye,
Bakary Sanneh,
Boubacar Diallo,
Amadou Woury Jallow &
Oumar Faye
Virology Department, Institut Pasteur de Dakar, Dakar, Senegal; National Public Health Laboratory, Banjul, Gambia
Sample details
Collection date
2024-11-26
Sampling location
Gambia
Data use terms
Data use terms
RESTRICTED
✕
Data use terms history
Changed
User
Data use terms
2026-05-20 09:49
ghostwriter
RESTRICTED until 2027-05-20
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/restricted-data
Clade
Clade
V
Host
Host
human (Homo sapiens)
Submission details
Submission ID
AR_24_427
Submitting group
Decode
Date submitted
2026-05-20 09:49:56 UTC
Date released
2026-05-20 09:51:54 UTC
Earliest release date
2026-05-20
Alignment and QC
Length
10481 (96.4%)
# of SNPs
463
# of ambiguous bases
1
# of unknown bases
6
Nucleotide mutations
Mutations called relative to the
NC_002031.1
reference
Substitutions
A
133
G
C
262
T
T
284
C
A
304
G
A
313
G
G
318
A
T
320
C
C
359
T
T
430
C
T
432
C
T
455
C
C
464
A
G
466
A
A
473
G
T
488
C
T
553
C
A
574
C
T
583
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_002031.1
reference
Substitutions
2K
2K:
A
20
V
C
C:
R
67
K
E
E:
R
52
G
E:
V
56
A
E:
V
170
A
E:
I
173
T
E:
T
200
K
E:
I
299
M
E:
F
305
S
E:
S
325
P
E:
R
331
K
E:
R
380
T
E:
V
407
A
E:
T
416
A
E:
N
450
S
M
M:
F
36
L
NS1
NS1:
F
79
L
NS1:
V
236
I
NS1:
K
276
R
NS1:
V
307
I
NS2a
NS2a:
I
88
V
NS2a:
V
118
M
NS2a:
A
167
T
NS2a:
F
169
L
NS2a:
A
172
T
NS2a:
F
183
S
NS2a:
I
220
L
NS2b
NS2b:
L
37
I
NS2b:
K
54
R
NS2b:
S
79
N
NS2b:
L
109
I
NS2b:
R
126
K
NS3
NS3:
V
143
I
NS3:
V
195
I
NS3:
V
280
I
NS3:
N
485
D
NS3:
S
613
A
NS3:
E
614
D
NS4a
NS4a:
I
58
V
NS4a:
V
107
I
NS4b
NS4b:
N
18
D
NS4b:
L
19
S
NS4b:
M
95
I
NS4b:
M
117
T
NS4b:
E
145
K
NS4b:
H
232
Y
RdRPol
RdRPol:
S
2
R
RdRPol:
R
22
Q
RdRPol:
I
78
T
RdRPol:
V
162
M
RdRPol:
K
275
R
RdRPol:
S
292
T
RdRPol:
N
391
K
RdRPol:
A
524
S
RdRPol:
K
564
N
RdRPol:
V
643
A
RdRPol:
T
645
A
RdRPol:
T
809
A
RdRPol:
E
815
G
RdRPol:
M
833
V
RdRPol:
K
836
E
RdRPol:
L
901
P
prM
prM:
F
125
L
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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