Democratic_Republic_of_the_Congo/PP_006X62P.1/2012
C. G. Albarino, T. Shoemaker, M. L. Khristova, J. F. Wamala, J. J. Muyembe, S. Balinandi, A. Tumusiime, S. Campbell, D. Cannon, A. Gibbons, E. Bergeron, B. Bird, K. Dodd, C. Spiropoulou, B. R. Erickson, L. Guerrero, B. Knust, S. T. Nichol, P. E. Rollin, U. Stroher & M. Khristova

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
2012
Sampling location
Democratic Republic of the Congo
Isolate name
EboBund-14 2012

Data use terms

Data use terms
OPEN

INSDC

INSDC accession
NCBI release date
2013-05-19
NCBI update date
2013-06-24

Submission details

Submission ID
KC545396.1
Date submitted
2026-05-15 20:14:49 UTC
Date released
2026-05-15 20:15:30 UTC
Earliest release date
2013-05-19

Alignment and QC

Length
18939 (100%)
# of SNPs
249
# of inserted bases
1
# of deleted bases
1
# of stop codons
1
Stop Codons
GP_003:367

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions

  • C213T
  • A266G
  • C439T
  • C530T
  • T643C
  • C646T
  • C1018T
  • A1108G
  • G1288A
  • T1345C
  • T1375C
  • T1453A
  • C1675T
  • T1696C
  • T1861C
  • A1954G
  • A2007G
  • G2027A
Deletions

9568
Insertions

ins_18902:A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K
  • GP:F310L
  • GP:E345K
  • GP:P365S
  • GP:P367L
  • GP:D368N
  • GP:P389L
  • GP:R394G
  • GP:H452Q
  • GP:T458I
  • GP:P481L
  • GP:T486I
  • GP:A489V

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:Q367*

L

  • L:Y116H
  • L:V395I
  • L:V402I
  • L:K1155R
  • L:S1323A
  • L:I1562V
  • L:K1570R
  • L:I1578V
  • L:L1595Q
  • L:D1614G
  • L:I1664R
  • L:D1667N
  • L:R1704I
  • L:Q1715K
  • L:S1716P
  • L:I1720T
  • L:D1772G
  • L:A1778V

NP

  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:D546S
  • NP:S559P
  • NP:S622L

VP24

  • VP24:S24N

VP30

  • VP30:S61F

VP35

  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:S26N
  • VP40:N28S
  • VP40:A31S
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue