PP_006X3GY.1

Ireland/PP_006X3GY.1/2026-02-05
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-02-05
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20447847

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-15 14:56alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.3.11

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-VIRL00000079/2026
Submitting group
Date submitted
2026-05-15 14:56:53 UTC
Date released
2026-05-15 15:02:38 UTC
Earliest release date
2026-05-15

Alignment and QC

Length
14880 (89%)
# of SNPs
191
# of inserted bases
7
# of unknown bases
1324

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T1359C
  • A1361G
  • T1413A
  • T1422C
  • G1459A
  • C1788T
  • C1806T
  • T2165C
  • G2298A
  • A2392G
  • C2410T
  • T2416C
  • T2481C
  • C2592T
  • A2695G
  • T2833C
  • T3045C
  • T3109C
Deletions
N/A
Insertions

ins_3154:A, ins_8939:GAAAAA

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:A23T
  • F:K123R

G

  • G:A57T
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:G224E
  • G:S243I
  • G:T245A
  • G:P256Q
  • G:K262E
  • G:I265L

L

  • L:N37D
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:V1472I
  • L:S1593G
  • L:N1723S
  • L:K2064R
  • L:T2069A

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:D62G
  • M2-2:T77A

N

  • N:K84R
  • N:A117T
  • N:V352A

P

  • P:L55P
  • P:T92M
Deletions
N/A
Insertions

L

ins_L:136:EK

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