PP_006W2E5.1

Argentina/PP_006W2E5.1/2024
C. M. Bellomo, S. Kehl, D. O. Alonso, W. Lopez, F. Cassinelli, R. M. Coelho, G. Bravo, S. Aguirre, M. Dib, N. Periolo, C. Toscano, J. Gil, F. Garcia Campos, I. Ferro, V. P. Martinez & S. D. Kehl

Malbran Institute, Virology

Sample details

Collection date
2024
Sampling location
Argentina (Guachipas, Salta)
Isolate name
Guachipas 2024

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 17:55insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession L
NCBI release date
2024-10-16

Host

Host

Submission details

Submission ID
PQ373861.1.L
Submitting group
Date submitted
2026-05-09 17:55:42 UTC
Date released
2026-05-09 17:57:47 UTC
Earliest release date
2024-10-16

Alignment and QC

Length L
1675 (25.5%)
# of SNPs L
321

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • G3458A
  • C3461T
  • C3471T
  • G3479A
  • T3483C
  • A3485T
  • A3488T
  • T3489C
  • A3491G
  • T3500A
  • G3509T
  • A3512T
  • T3515A
  • G3518A
  • A3524T
  • A3527T
  • T3539A
  • A3545T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

RdRp

  • RdRp:N1258Q
  • RdRp:A1260S
  • RdRp:V1264I
  • RdRp:K1298R
  • RdRp:N1357S
  • RdRp:L1360G
  • RdRp:E1361D
  • RdRp:S1440A
  • RdRp:T1444S
  • RdRp:L1514M
  • RdRp:V1519I
  • RdRp:E1555D
  • RdRp:T1593A
  • RdRp:V1617I
Deletions
N/A
Insertions
N/A

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