PP_006W2C9.1

Argentina/PP_006W2C9.1/2022

R. Coelho, S. Kehl, N. Periolo, D. Alonso, C. Bellomo & V. Martinez

INEI ANLIS, Virology

Sample details

Collection date

2022

Sampling location

Argentina

Isolate name

Epuyen

Data use terms

Changed	User	Data use terms
2026-05-09 17:55	insdc_ingest_user	OPEN

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

INSDC

INSDC accession L

PQ215670.1

INSDC accession M

PQ215669.1

INSDC accession S

PQ215668.1

NCBI release date

2024-09-25

Host

Is lab host

True

Submission details

Submission ID

PQ215670.1.L/PQ215669.1.M/PQ215668.1.S

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-05-09 17:55:42 UTC

Date released

2026-05-09 17:57:47 UTC

Earliest release date

2024-09-25

Alignment and QC

Length L

6477 (98.7%)

# of SNPs L

377

Length M

3647 (99.1%)

# of SNPs M

207

# of inserted bases M

Length S

1848 (98.5%)

# of SNPs S

120

# of inserted bases S

# of deleted bases S

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

T47C
G53A
C74T
A86G
G89A
C131T
T143C
C146T
C147T
G149A
C155T
T182C
A200G
A218G
A296G
T297C
A302G
T326C

M

T74C
G114A
C159A
C174T
C190T
A192G
C231T
C243T
A264G
T324C
G339A
T345C
A360G
T363C
T387C
C394T
C408T
T414C

S

T61C
G63A
G66A
G120A
A135G
C172T
A219G
T225C
A240G
T244C
A261G
T306C
A312G
G315A
A318G
T357C
T363C
T366C

Deletions

S

1443, 1573

Insertions

M

ins_3504:ATATACAT

S

ins_1482:CC, ins_1555:G, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references