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PP_006W0JY.1
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Download metadata TSV
Uruguay/PP_006W0JY.1/2008-10
A. M. Cabrera,
D. Romero,
J. C. Guerrero,
M. Clara,
A. Delfraro &
A. B. Delfraro
Facultad de Ciencias, Virology Section
Sample details
Collection date
2008-10
Sampling location
Uruguay (Laguna de Castillos, Rocha)
Isolate name
n009
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-05-09 17:55
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession S
ON544082.1
NCBI release date
2023-06-17
Host
Host
yellow pygmy rice rat (Oligoryzomys flavescens)
Submission details
Submission ID
ON544082.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-05-09 17:55:42 UTC
Date released
2026-05-09 17:57:47 UTC
Earliest release date
2023-06-17
Alignment and QC
Length S
936 (28%)
# of SNPs S
97
# of unknown bases S
412
Nucleotide mutations
Mutations called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
S
A
321
G
T
327
C
C
328
T
G
339
C
C
345
T
C
346
T
T
354
C
T
357
C
A
360
C
T
367
C
G
369
T
G
387
A
T
393
C
A
401
G
G
403
T
A
408
C
A
411
G
A
414
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
N
N:
K
120
R
N:
A
121
S
N:
V
168
I
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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