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PP_006VVZ9.1
Download
Download FASTA
Download metadata TSV
Bolivia/PP_006VVZ9.1/2008
C. D. Cruz,
B. M. Forshey,
E. Vallejo,
R. Agudo,
J. Vargas,
D. L. Blazes,
C. Guevara,
V. A. Laguna-Torres,
E. S. Halsey,
T. J. Kochel,
V. A. Laguna &
C. L. Guevara
NAMRU-6, Virology
Sample details
Collection date
2008
Sampling location
Bolivia
Isolate name
FVB554
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-05-09 17:55
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession M
JF750422.1
INSDC accession S
JF750419.1
NCBI release date
2011-09-21
Host
Host
human (Homo sapiens)
Submission details
Submission ID
JF750422.1.M/JF750419.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-05-09 17:55:42 UTC
Date released
2026-05-09 17:57:47 UTC
Earliest release date
2011-09-21
Alignment and QC
Length M
1330 (36.2%)
# of SNPs M
256
Length S
1287 (68.8%)
# of SNPs S
212
Nucleotide mutations
Mutations called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
M
A
1683
G
A
1686
G
C
1695
T
G
1699
A
A
1701
C
C
1708
T
A
1725
T
G
1745
A
A
1746
G
T
1755
C
C
1758
A
A
1764
G
T
1770
C
A
1788
G
A
1794
G
G
1795
T
C
1809
A
T
1810
C
Show more
S
C
50
A
T
61
C
G
63
A
G
66
A
C
72
T
A
90
G
G
120
A
G
132
A
G
142
A
C
172
T
A
183
G
C
184
A
T
202
C
T
225
C
G
231
A
A
240
G
T
244
A
T
262
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
GPC
GPC:
V
550
I
GPC:
H
553
Y
GPC:
R
565
K
GPC:
I
579
M
GPC:
A
582
S
GPC:
S
592
A
GPC:
I
593
V
GPC:
K
610
R
GPC:
K
615
R
GPC:
C
642
L
GPC:
I
644
L
GPC:
V
645
I
GPC:
I
646
V
GPC:
M
656
L
GPC:
S
681
A
GPC:
K
693
R
GPC:
Q
743
K
GPC:
S
752
A
Show more
N
N:
T
3
N
N:
V
34
M
N:
L
68
M
N:
A
121
S
N:
G
226
S
N:
D
234
E
N:
E
238
D
N:
A
242
D
N:
V
252
S
N:
A
253
P
N:
S
259
A
N:
M
263
A
N:
E
274
D
N:
I
281
V
N:
E
297
D
N:
S
332
A
N:
S
411
A
NSs
NSs:
R
4
K
NSs:
D
21
G
NSs:
L
35
S
NSs:
G
37
D
NSs:
Q
40
R
NSs:
I
62
T
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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