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PP_006VLWQ.1
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Download FASTA
Download metadata TSV
PP_006VLWQ.1
S. Levis,
S. P. Morzunov,
J. E. Rowe,
D. Enria,
N. Pini,
G. Calderon,
M. Sabattini,
S. C. St Jeor &
S. C. St. Jeor
University of Nevada, Microbiology
Sample details
Isolate name
Ol23133
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-05-09 17:55
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession M
AF028026.1
NCBI release date
1997-12-01
Host
Host
mice and others (Oligoryzomys longicaudatus)
Submission details
Submission ID
AF028026.1.M
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-05-09 17:55:42 UTC
Date released
2026-05-09 17:56:44 UTC
Earliest release date
1997-12-01
Alignment and QC
Length M
1654 (45.1%)
# of SNPs M
96
Nucleotide mutations
Mutations called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
M
C
1464
T
T
1468
C
G
1470
C
G
1491
A
T
1495
C
A
1503
G
C
1515
T
T
1539
C
G
1560
A
C
1563
A
A
1566
G
G
1581
A
T
1594
C
G
1599
A
A
1660
G
T
1662
C
A
1671
G
C
1695
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
GPC
GPC:
I
537
V
GPC:
S
869
T
GPC:
Y
1018
H
Gc
Gc:
S
218
T
Gc:
Y
367
H
Gn
Gn:
I
537
V
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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