PP_006VLUU.1

PP_006VLUU.1
G. Calderon, D. Enria, S. Levis, S. P. Morzunov, N. Pini, J. E. Rowe, M. Sabattini, S. C. St Jeor & S. C. St. Jeor

University of Nevada, Microbiology

Sample details

Isolate name
Ol22996

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 17:55insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession M
INSDC accession S
NCBI release date
1997-12-01

Host

Host

Submission details

Submission ID
AF028024.1.M/AF482715.1.S
Submitting group
Date submitted
2026-05-09 17:55:42 UTC
Date released
2026-05-09 17:56:44 UTC
Earliest release date
1997-12-01

Alignment and QC

Length M
3646 (100%)
# of SNPs M
767
# of inserted bases M
4
# of deleted bases M
29
Length S
1919 (100%)
# of SNPs S
304
# of inserted bases S
74
# of deleted bases S
26

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

M

  • A30G
  • A32T
  • T34G
  • G38A
  • G41A
  • G43C
  • G45T
  • T47G
  • T48A
  • A51G
  • C67T
  • G70A
  • T75C
  • C76T
  • T78G
  • A81G
  • A89C
  • G93A

S

  • G28A
  • T61C
  • G63A
  • C72T
  • G120A
  • G129A
  • G133A
  • A135G
  • C156G
  • C172T
  • A234G
  • A240G
  • T244C
  • T262C
  • A312G
  • G315A
  • G330C
  • A331C
Deletions

M

3493, 3502, 3533-3538, 3555-3559, 3570-3585

S

1399-1401, 1436, 1437, 1479, 1480, 1500, 1640, 1641, 1654-1658, 1685-1691, 1745, 1746, 1769, 1777
Insertions

M

ins_49:G, ins_3521:CT, ins_3525:T

S

ins_1333:CATAA, ins_1336:TAAGAGCCATTATGCT, ins_1342:GCGAAAATAGTTTACA, ins_1352:TATATC, ins_1360:GGC, ins_1383:T, ins_1431:T, ins_1525:C, ins_1555:CTA, ins_1560:CAATATATAG, ins_1569:AAGTA, ins_1664:CT, ins_1669:T, ins_1755:A, ins_1820:TAA

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:V7I
  • GPC:Y13S
  • GPC:L15V
  • GPC:G48N
  • GPC:S51P
  • GPC:E53G
  • GPC:I58L
  • GPC:N65D
  • GPC:H69Y
  • GPC:S72P
  • GPC:A74T
  • GPC:F78Y
  • GPC:D88E
  • GPC:S97A
  • GPC:A102S
  • GPC:P117S
  • GPC:K124N
  • GPC:V126I

Gc

  • Gc:M5L
  • Gc:P70T
  • Gc:S101A
  • Gc:C215W
  • Gc:P231T
  • Gc:E282D
  • Gc:L408V
  • Gc:K439R
  • Gc:V464I
  • Gc:I466V
  • Gc:L469F
  • Gc:I472V
  • Gc:M473L
  • Gc:V476I
  • Gc:T486A

Gn

  • Gn:V7I
  • Gn:Y13S
  • Gn:L15V
  • Gn:G48N
  • Gn:S51P
  • Gn:E53G
  • Gn:I58L
  • Gn:N65D
  • Gn:H69Y
  • Gn:S72P
  • Gn:A74T
  • Gn:F78Y
  • Gn:D88E
  • Gn:S97A
  • Gn:A102S
  • Gn:P117S
  • Gn:K124N
  • Gn:V126I

N

  • N:A31T
  • N:D38E
  • N:G226S
  • N:D234E
  • N:E238D
  • N:V252A
  • N:A253L
  • N:S259A
  • N:M263A
  • N:E274D
  • N:I281V
  • N:T289I
  • N:E297D
  • N:S332A

NSs

  • NSs:R3K
  • NSs:Q5R
  • NSs:T12R
  • NSs:N38S
  • NSs:Q40R
Deletions
N/A
Insertions
N/A

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