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PP_006VLTW.1
Download
Download FASTA
Download metadata TSV
PP_006VLTW.1
S. Levis,
S. P. Morzunov,
J. E. Rowe,
D. Enria,
N. Pini,
G. Calderon,
M. Sabattini,
S. C. St Jeor &
S. C. St. Jeor
University of Nevada, Microbiology
Sample details
Isolate name
Hu39694
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-05-09 17:55
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession M
AF028023.1
NCBI release date
1997-12-01
Submission details
Submission ID
AF028023.1.M
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-05-09 17:55:42 UTC
Date released
2026-05-09 17:56:44 UTC
Earliest release date
1997-12-01
Alignment and QC
Length M
3654 (100%)
# of SNPs M
756
# of inserted bases M
6
# of deleted bases M
23
# of frame shifts M
2
Frame shifts M
GPC:1043-1046(nt:3176-3189),Gc:392-395(nt:3176-3189)
Nucleotide mutations
Mutations called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
M
A
28
G
A
32
C
T
34
G
G
38
A
A
39
G
G
41
A
G
43
T
G
45
T
T
47
G
T
48
A
A
51
G
C
67
T
G
70
A
T
75
C
C
76
T
T
78
G
A
89
C
G
93
A
Show more
Deletions
M
3175, 3476-3488, 3492-3497, 3546, 3547, 3566
Insertions
M
ins_50:A, ins_3189:G, ins_3468:T, ins_3550:A, ins_3560:AA
Amino acid substitutions
Substitutions called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
GPC
GPC:
V
7
I
GPC:
Y
13
S
GPC:
K
21
R
GPC:
K
27
R
GPC:
S
51
P
GPC:
A
54
T
GPC:
A
55
V
GPC:
I
58
L
GPC:
A
74
T
GPC:
F
78
Y
GPC:
I
114
V
GPC:
P
117
S
GPC:
V
126
I
GPC:
L
153
S
GPC:
S
168
N
GPC:
I
185
V
GPC:
D
206
E
GPC:
T
207
M
Show more
Gc
Gc:
M
5
L
Gc:
I
19
V
Gc:
P
70
T
Gc:
S
101
A
Gc:
V
125
F
Gc:
V
186
I
Gc:
I
210
L
Gc:
P
231
T
Gc:
E
282
D
Gc:
M
355
I
Gc:
L
363
M
Gc:
T
372
S
Gc:
L
408
V
Gc:
I
466
V
Gc:
L
469
F
Gc:
M
473
L
Gc:
S
475
N
Gc:
V
476
I
Gn
Gn:
V
7
I
Gn:
Y
13
S
Gn:
K
21
R
Gn:
K
27
R
Gn:
S
51
P
Gn:
A
54
T
Gn:
A
55
V
Gn:
I
58
L
Gn:
A
74
T
Gn:
F
78
Y
Gn:
I
114
V
Gn:
P
117
S
Gn:
V
126
I
Gn:
L
153
S
Gn:
S
168
N
Gn:
I
185
V
Gn:
D
206
E
Gn:
T
207
M
Show more
Deletions
GPC
GPC:1042
Gc
Gc:391
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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