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PP_006V7AA.1
Download
Download FASTA
Download metadata TSV
USA/PP_006V7AA.1/2026-03-22
H. D. Kunerth,
M. Plumb,
D. Evans,
L. Bohnker-Voels,
K. Pung,
B. Weber,
J. Garfin,
A. Mondelli,
J. Jencks,
M. Anacker &
S. Namugenyi
Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab
Sample details
Collection date
2026-03-22
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVA-04490
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-05-01 07:35
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.5.1
INSDC
INSDC accession
PZ295478.1
BioProject accession
PRJNA1048457
BioSample accession
SAMN57248807
NCBI release date
2026-04-26
NCBI update date
2026-04-26
Raw reads accession
SRR38082543
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PZ295478.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-05-01 07:35:40 UTC
Date released
2026-05-01 07:43:36 UTC
Earliest release date
2026-04-26
Alignment and QC
Length
15045 (91.7%)
# of SNPs
237
# of inserted bases
1
# of deleted bases
3
# of unknown bases
1088
# of stop codons
1
Stop Codons
G:312
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
C
90
T
T
162
G
C
183
T
C
228
T
A
285
G
G
590
A
C
627
A
A
658
G
T
697
C
C
871
T
T
905
C
A
940
C
C
982
T
A
1009
G
C
1012
T
A
1021
G
T
1028
C
G
1050
A
Show more
Deletions
7516-7518
Insertions
ins_2298:A
Amino acid substitutions
Substitutions called relative to the
PP109421.1
reference
Substitutions
F
F:
A
102
V
F:
T
122
A
G
G:
A
57
V
G:
P
71
L
G:
H
90
Y
G:
S
100
I
G:
L
101
F
G:
T
118
I
G:
T
119
P
G:
P
120
T
G:
I
134
K
G:
P
206
Q
G:
K
209
R
G:
G
224
E
G:
S
243
I
G:
L
248
I
G:
S
250
Y
G:
K
262
E
G:
I
265
L
G:
E
271
K
Show more
L
L:
I
81
V
L:
P
171
L
L:
R
256
K
L:
Y
585
F
L:
Y
598
H
L:
V
740
A
L:
L
1438
Q
L:
K
1722
N
L:
N
1723
G
L:
E
1725
G
L:
G
1731
D
L:
Y
1732
H
L:
V
1943
D
M
M:
L
47
Q
M:
M
73
L
M2-1
M2-1:
I
132
T
M2-1:
S
176
P
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
N
N:
Y
216
H
N:
V
352
A
NS2
NS2:
P
10
Q
P
P:
E
2
D
SH
SH:
I
31
M
SH:
V
49
I
SH:
R
61
Q
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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