PP_006V4QJ.1

USA/PP_006V4QJ.1/2026-03-29
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-03-29
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04568

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-01 07:32insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-04-26
NCBI update date
2026-04-26
Raw reads accession

Host

Host

Submission details

Submission ID
PZ295556.1
Submitting group
Date submitted
2026-05-01 07:32:46 UTC
Date released
2026-05-01 07:40:46 UTC
Earliest release date
2026-04-26

Alignment and QC

Length
14872 (91.4%)
# of SNPs
153
# of inserted bases
7
# of deleted bases
2
# of unknown bases
952

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T493A
  • G513T
  • C564T
  • G579A
  • C688T
  • T707C
  • G955A
  • T1014C
  • T1022C
  • G1385A
  • C1714A
  • G1732A
  • G1801A
  • T1846C
  • G1963A
  • C1996T
  • C2074T
  • C2198T
Deletions

973, 4586
Insertions

ins_3200:GAA, ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:R209Q
  • F:S211N

G

  • G:A74V
  • G:K85E
  • G:T131E
  • G:I137T
  • G:N202T
  • G:P214S
  • G:P221L
  • G:I268T
  • G:T306K

L

  • L:K570R
  • L:M646L
  • L:R1759K
  • L:R1872K
  • L:T1987I
  • L:N2079S

M2-1

  • M2-1:S179P

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:C49F

N

  • N:V97I

P

  • P:T72A
Deletions
N/A
Insertions
N/A

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