PP_006UCGV.1

USA/PP_006UCGV.1/2026-03-20
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-03-20
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVA-04445

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-22 01:18insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-04-14
NCBI update date
2026-04-14
Raw reads accession

Host

Host

Submission details

Submission ID
PZ261168.1
Submitting group
Date submitted
2026-04-22 01:18:48 UTC
Date released
2026-04-22 01:26:25 UTC
Earliest release date
2026-04-14

Alignment and QC

Length
15046 (98.1%)
# of SNPs
147
# of deleted bases
1
# of unknown bases
107

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C90T
  • C183T
  • T697C
  • C1012T
  • T1035A
  • C1046T
  • G1050A
  • T1359C
  • T1422C
  • C1788T
  • C1806T
  • T2165C
  • A2392G
  • T2481C
  • A2695G
  • T3109C
  • T3136C
  • T3163C
Deletions

3213
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:P120L
  • G:S121I
  • G:I134K
  • G:Q140R
  • G:P206Q
  • G:K209R
  • G:G224E
  • G:V225A
  • G:S243I
  • G:K262E
  • G:I265L
  • G:D284G
  • G:Y304H
  • G:T320A

L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:M1225I
  • L:L1438Q
  • L:I1653V
  • L:K1661N
  • L:H1690Y
  • L:H1707Q
  • L:N1719Y
  • L:N1723S
  • L:N1724D
  • L:E1725G
  • L:G1731D
  • L:Y2163N

M

  • M:M43I

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N

N

  • N:V352A

P

  • P:L55P
Deletions
N/A
Insertions
N/A

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