PP_006UB5J.1

USA/PP_006UB5J.1/2026-03-14
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-03-14
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04421

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-22 01:18insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.8

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-04-14
NCBI update date
2026-04-14
Raw reads accession

Host

Host

Submission details

Submission ID
PZ250830.1
Submitting group
Date submitted
2026-04-22 01:18:42 UTC
Date released
2026-04-22 01:26:03 UTC
Earliest release date
2026-04-14

Alignment and QC

Length
15141 (95.2%)
# of SNPs
156
# of inserted bases
5
# of deleted bases
2
# of unknown bases
653

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G513T
  • A514G
  • C578T
  • G579A
  • A958G
  • C998A
  • C1204T
  • G1385A
  • A1654G
  • G1732A
  • A1819G
  • T1846C
  • C2074T
  • C2198T
  • T2328C
  • C2554T
  • C2691T
  • G2877A
Deletions

975, 4586
Insertions

ins_3112:C, ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:N124S
  • F:I129T
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:H112Y
  • G:P214S
  • G:P221L
  • G:V249A
  • G:D251G
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:K276N
  • G:Y285H

L

  • L:N176S
  • L:S560P
  • L:K570R
  • L:D972N
  • L:V1721I
  • L:R1759K
  • L:I1832V
  • L:T1987I
  • L:M2104T

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue