PP_006UAJS.1

USA/PP_006UAJS.1/2026-03-13
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-03-13
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04399

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-22 01:18insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-04-14
NCBI update date
2026-04-14
Raw reads accession

Host

Host

Submission details

Submission ID
PZ250809.1
Submitting group
Date submitted
2026-04-22 01:18:42 UTC
Date released
2026-04-22 01:26:03 UTC
Earliest release date
2026-04-14

Alignment and QC

Length
15141 (96.9%)
# of SNPs
148
# of inserted bases
4
# of deleted bases
1
# of unknown bases
386

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T197C
  • G513T
  • G579A
  • C598T
  • C829T
  • A853G
  • T925C
  • C998A
  • G1028A
  • T1123C
  • A1378G
  • G1385A
  • T1541C
  • G1732A
  • T1846C
  • G2065A
  • C2074T
  • T2131C
Deletions

4586
Insertions

ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N

G

  • G:A74V
  • G:S100G
  • G:T108I
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:E259K
  • G:T264I
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:P304L

L

  • L:R138K
  • L:V488A
  • L:K570R
  • L:V1716I
  • L:R1759K
  • L:V1965I
  • L:D1985E
  • L:T1987I
  • L:Y2060H

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:N46D
  • M2-2:C49F

N

  • N:V97I
  • N:Y149H
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue