PP_006U2BF.1

Turkey/PP_006U2BF.1/2023-06-03
Q. Lin, N. Elaldi, M. Yigit, B. Yildiz, R. Hewson, M. Lopez-Garcia, G. Lyth, A. N. Pektas, B. Koksal, T. N. Tasseten, A. Deniz, H. Bedir, Y. Cakir Kiymaz, Z. Vatansever, C. Molina-Paris & T. Leitner

Kafkas University, Department of Parasitology

Sample details

Collection date
2023-06-03
Sampling location
Turkey (Sivas, Zara, Akoren)
Isolate name
TRKAU/T-360-5/Zara/2023

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-22 01:16insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession S
NCBI release date
2026-04-19

Host

Host

Submission details

Submission ID
PX874847.1.S
Submitting group
Date submitted
2026-04-22 01:16:44 UTC
Date released
2026-04-22 01:25:14 UTC
Earliest release date
2026-04-19

Lineage

Segment S Lineage
V

Alignment and QC

Length S
1650 (98.6%)
# of SNPs S
252
# of inserted bases S
1

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T49C
  • A50T
  • G54A
  • T79C
  • A81G
  • G99A
  • G100A
  • A109G
  • C115T
  • G134A
  • C142T
  • T157C
  • C166T
  • G171A
  • T175A
  • C178A
  • T182C
  • C187T
Deletions
N/A
Insertions

S

ins_1577:A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:N9S
  • NP:R15K
  • NP:V27M
  • NP:S39N
  • NP:R45K
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:I246V
  • NP:K265R
  • NP:R270K
  • NP:S301G
  • NP:A307P
  • NP:Y311F
Deletions
N/A
Insertions
N/A

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