PP_006TUDM.1

Ireland/PP_006TUDM.1/2026-01-29
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-01-29
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20415982

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-08 17:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.3.7

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00010379/2026
Submitting group
Date submitted
2026-04-08 17:08:47 UTC
Date released
2026-04-08 17:09:28 UTC
Earliest release date
2026-04-08

Alignment and QC

Length
13852 (86.1%)
# of SNPs
189
# of inserted bases
3
# of deleted bases
1
# of unknown bases
746

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T1359C
  • T1413A
  • T1422C
  • T1708C
  • C1788T
  • C1806T
  • T1851C
  • T2165C
  • C2244T
  • A2392G
  • T2481C
  • C2592T
  • A2695G
  • G2782A
  • C2993T
  • T3109C
  • C3125T
  • T3136C
Deletions

4592
Insertions

ins_3154:A, ins_7586:AA

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:T13I

G

  • G:H67N
  • G:H90Y
  • G:L101F
  • G:G106R
  • G:T113I
  • G:V131D
  • G:I134K
  • G:P146L
  • G:R151Q
  • G:N178G
  • G:K221R
  • G:G224E
  • G:S243I
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:P274L

L

  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:D1644E
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:R2117K

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:V352A

P

  • P:L55P
  • P:T92M
Deletions
N/A
Insertions
N/A

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