PP_006TTYH.1

Ireland/PP_006TTYH.1/2025-12-10
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2025-12-10
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20415967

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-08 17:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.1.4

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00094225/2025
Submitting group
Date submitted
2026-04-08 17:08:47 UTC
Date released
2026-04-08 17:09:28 UTC
Earliest release date
2026-04-08

Alignment and QC

Length
13759 (85.8%)
# of SNPs
197
# of deleted bases
2
# of unknown bases
704

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C1203T
  • T1224C
  • C1293T
  • T1359C
  • G1368A
  • G1662A
  • T1668C
  • T1671C
  • A1713G
  • C1788T
  • C1806T
  • T1920C
  • T1980C
  • T2165C
  • A2392G
  • T2458C
  • C2479T
  • T2481C
Deletions

4175, 4592
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:R113K

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:N103T
  • G:G106R
  • G:A122V
  • G:I133V
  • G:I134K
  • G:L142S
  • G:S144I
  • G:T203I
  • G:K221R
  • G:G224V
  • G:V225A
  • G:L226F

L

  • L:N143D
  • L:D146G
  • L:Y598H
  • L:L1438Q
  • L:I1653V
  • L:I1656T
  • L:K1661N
  • L:N1719S
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:G1735D
  • L:L1932I
  • L:V1934I

M

  • M:M43I

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N

N

  • N:V352A

P

  • P:L55P
  • P:I62T
Deletions
N/A
Insertions
N/A

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