PP_006TTSV.1

Ireland/PP_006TTSV.1/2026-02-27
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-02-27
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20415949

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-08 17:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.3.3

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00017223/2026
Submitting group
Date submitted
2026-04-08 17:08:47 UTC
Date released
2026-04-08 17:09:28 UTC
Earliest release date
2026-04-08

Alignment and QC

Length
15227 (96%)
# of SNPs
230
# of inserted bases
2
# of unknown bases
614

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T59C
  • T66A
  • A67G
  • G74A
  • C90T
  • T114C
  • C183T
  • A354G
  • A449C
  • G587T
  • C589T
  • G640A
  • A991T
  • C1012T
  • G1034A
  • G1050A
  • G1077A
  • T1137C
Deletions
N/A
Insertions

ins_3154:A, ins_15115:T

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N161D
  • G:N178G
  • G:T203I
  • G:K204N
  • G:G224E
  • G:P234S
  • G:S243I
  • G:N255D
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L

L

  • L:S141A
  • L:P171L
  • L:R256T
  • L:Y598H
  • L:N948S
  • L:I1114V
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:S1730N
  • L:G1731D

M2-1

  • M2-1:S176P
  • M2-1:N185D

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:H45Y
  • M2-2:T77A

N

  • N:V352A

NS1

  • NS1:G2D
  • NS1:N127T

NS2

  • NS2:M14I

P

  • P:L55P
  • P:E89D
  • P:T92M
Deletions
N/A
Insertions
N/A

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