PP_006TT70.1

Ireland/PP_006TT70.1/2026-01-09
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-01-09
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20415951

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-08 17:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.3.12

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00005482/2026
Submitting group
Date submitted
2026-04-08 17:08:47 UTC
Date released
2026-04-08 17:09:28 UTC
Earliest release date
2026-04-08

Alignment and QC

Length
15207 (93.8%)
# of SNPs
222
# of inserted bases
3
# of unknown bases
930

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • T106C
  • C183T
  • A357G
  • A517T
  • A563G
  • G587T
  • A610G
  • T832C
  • C865A
  • T905C
  • T975C
  • A995T
  • C1012T
  • G1034A
  • G1050A
Deletions
N/A
Insertions

ins_3154:A, ins_5630:AA

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:S276N

G

  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:K213R
  • G:G224E
  • G:L226P
  • G:P230T
  • G:I236T
  • G:S243I
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:S267P
  • G:S270P

L

  • L:P171L
  • L:A173S
  • L:S240N
  • L:R256K
  • L:L835M
  • L:E1190D
  • L:L1438Q
  • L:V1721I
  • L:N1723S
  • L:N1724D
  • L:E1725G
  • L:S1730N
  • L:G1731D
  • L:V2129I

M2-2

  • M2-2:S44N
  • M2-2:T77A
  • M2-2:D78Y

N

  • N:K137R
  • N:N207T
  • N:V352A

P

  • P:L55P
  • P:T72N
  • P:T92M
  • P:N230D
Deletions
N/A
Insertions
N/A

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