Please note that due to scheduled maintenance, some Pathoplexus features (such as sequence submission and user creation) will be unavailable on Friday, 24 April.
The migration is planned to take approximately 1–2 hours, starting at 10:00 CET.

PP_006TKGQ.1

DENV-2/India/2/2025-08-28
B. K. Pati, A. Sarfraz, M. Z. Farooque & A. Kumar

All India Institute of Medical Sciences, Microbiology

Sample details

Collection date
2025-08-28
Sampling location
India (Bihar, Gaya)
Isolate name
2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-06 04:35insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2026-04-05
NCBI update date
2026-04-05

Host

Host

Submission details

Submission ID
PZ225547.1
Submitting group
Date submitted
2026-04-06 04:35:48 UTC
Date released
2026-04-06 04:36:21 UTC
Earliest release date
2026-04-05

Lineage & Serotype

Lineage
2II_F.1.1
Serotype
DENV-2

Alignment and QC

Length
487 (4.54%)
# of SNPs
37

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • A152C
  • G168A
  • A177G
  • G210A
  • T226C
  • A228G
  • G252A
  • A276G
  • G294A
  • G297A
  • T312C
  • A324G
  • T330C
  • T336C
  • G372T
  • T384C
  • T397A
  • C405T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

C

  • C:E19A
  • C:S101T
  • C:M104I
  • C:L108M

prM

  • prM:G7N
  • prM:K16R
  • prM:R19K
  • prM:S28E
  • prM:A29N
  • prM:I37M
  • prM:M49I
  • prM:K52N
  • prM:R55L
  • prM:I56L
  • prM:T57R
  • prM:E58Q
  • prM:T59N
  • prM:D62E
  • prM:V64I
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue