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PP_006RJ99.1
Download
Download FASTA
Download metadata TSV
USA/PP_006RJ99.1/2026-02-24
H. D. Kunerth,
M. Plumb,
D. Evans,
L. Bohnker-Voels,
K. Pung,
B. Weber,
J. Garfin,
A. Mondelli,
J. Jencks,
M. Anacker &
S. Namugenyi
Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab
Sample details
Collection date
2026-02-24
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVA-03886
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-30 03:29
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.1.10
INSDC
INSDC accession
PZ173724.1
BioProject accession
PRJNA1048457
BioSample accession
SAMN56614777
NCBI release date
2026-03-29
NCBI update date
2026-03-29
Raw reads accession
SRR37710723
Host
Host
Homo sapiens
Submission details
Submission ID
PZ173724.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-30 03:29:26 UTC
Date released
2026-03-30 03:37:05 UTC
Earliest release date
2026-03-29
Alignment and QC
Length
15044 (93%)
# of SNPs
229
# of deleted bases
3
# of unknown bases
892
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
C
90
T
C
183
T
G
198
A
T
246
A
C
379
T
A
399
G
G
1000
A
C
1012
T
T
1032
C
T
1035
A
C
1046
A
T
1048
C
G
1050
A
A
1080
G
T
1359
C
G
1662
A
T
1668
C
T
1671
C
Show more
Deletions
4592, 7587, 7588
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
PP109421.1
reference
Substitutions
F
F:
S
130
G
F:
S
377
N
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
A
116
V
G:
I
134
K
G:
L
142
S
G:
P
143
L
G:
K
216
E
G:
G
224
E
G:
V
225
A
G:
P
234
L
G:
S
243
I
G:
L
247
P
G:
K
262
E
G:
I
265
L
G:
G
272
D
G:
Y
273
H
G:
P
276
S
Show more
L
L:
R
114
K
L:
N
143
D
L:
P
171
L
L:
T
179
S
L:
S
240
N
L:
R
256
K
L:
E
257
G
L:
Y
598
H
L:
L
1438
Q
L:
I
1653
V
L:
K
1661
N
L:
H
1707
N
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
N
1748
S
L:
S
1789
F
L:
Y
2163
N
M
M:
M
43
I
M:
S
168
N
M2-1
M2-1:
S
176
P
M2-1:
T
184
A
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
M2-2:
P
49
S
N
N:
Y
216
H
N:
V
352
A
P
P:
L
55
P
P:
T
72
I
SH
SH:
I
32
V
SH:
I
38
S
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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