PP_006R0K6.1

USA/PP_006R0K6.1/2026-02-15
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-02-15
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-03794

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-25 03:38insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.8

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-24
NCBI update date
2026-03-24
Raw reads accession

Host

Host

Submission details

Submission ID
PZ154715.1
Submitting group
Date submitted
2026-03-25 03:38:49 UTC
Date released
2026-03-25 03:46:35 UTC
Earliest release date
2026-03-24

Alignment and QC

Length
15141 (97.3%)
# of SNPs
143
# of inserted bases
5
# of deleted bases
2
# of unknown bases
324

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G513T
  • C578T
  • G579A
  • T592C
  • C628T
  • T727C
  • T815C
  • C998A
  • C1204T
  • G1385A
  • T1630C
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • A2625G
  • C2691T
Deletions

973, 4586
Insertions

ins_3112:C, ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:H112Y
  • G:T131A
  • G:N210S
  • G:P214S
  • G:P221L
  • G:V249A
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:*311Q

L

  • L:I56M
  • L:N176S
  • L:S560P
  • L:K570R
  • L:V1721I
  • L:R1759K
  • L:I1832V
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS2

  • NS2:Y78H
Deletions
N/A
Insertions
N/A

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