PP_006QNGT.1

Australia/PP_006QNGT.1/2025-12-05
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

WHO Collaborating Centre for Reference and Research on Influenza

Sample details

Collection date
2025-12-05
Sampling location
Australia (Western Australia)
GISAID Isolate ID
EPI_ISL_20384444

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.3

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host gender
Female

Submission details

Submission ID
hRSV/A/Australia/WA-PSA0011/2025
Submitting group
Date submitted
2026-03-25 02:51:45 UTC
Date released
2026-03-25 02:53:22 UTC
Earliest release date
2026-03-25

Alignment and QC

Length
15225 (100%)
# of SNPs
233
# of inserted bases
7
# of deleted bases
3

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • C42T
  • T59C
  • T66A
  • A67G
  • C75A
  • C90T
  • C183T
  • G192A
  • A565G
  • G587T
  • C983A
  • C1012T
  • C1030T
  • G1034A
  • G1050A
  • G1077A
  • C1344T
  • T1359C
Deletions
3155, 3156, 4174
Insertions
ins_0:TTGC, ins_3214:G, ins_15115:TT

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:T119I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:Q218R
  • G:G224E
  • G:S243I
  • G:T245A
  • G:T246K
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:D284G
  • G:T288A
  • G:P298L

L

  • L:N37D
  • L:P171L
  • L:D183N
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:I1658T
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:S1789T
  • L:K2064R
  • L:T2069A

M2-1

  • M2-1:S176P
  • M2-1:N185S

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:D62G
  • M2-2:T77A

N

  • N:Y216H
  • N:V352A

P

  • P:L55P
  • P:T92I
Deletions
N/A
Insertions
N/A

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