PP_006QN0R.1

Australia/PP_006QN0R.1/2025-10-10
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

WHO Collaborating Centre for Reference and Research on Influenza

Sample details

Collection date
2025-10-10
Sampling location
Australia (Tasmania)
GISAID Isolate ID
EPI_ISL_20384414

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.3.2

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Sampling

Sample type
Other: Swab

Host

Host gender
Female

Submission details

Submission ID
hRSV/A/Australia/TAS-PSA0004/2025
Submitting group
Date submitted
2026-03-25 02:51:45 UTC
Date released
2026-03-25 02:53:22 UTC
Earliest release date
2026-03-25

Alignment and QC

Length
15217 (99.9%)
# of SNPs
220
# of inserted bases
5
# of deleted bases
2

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T66A
  • A67G
  • C90T
  • C156T
  • C183T
  • A280G
  • C524T
  • G587T
  • G590A
  • A682G
  • C769A
  • C1012T
  • G1034A
  • G1050A
  • G1077A
  • G1191A
  • T1359C
  • T1413A
Deletions
4174, 4592
Insertions
ins_0:TTGC, ins_3154:A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:S276N

G

  • G:T4N
  • G:P71L
  • G:P88S
  • G:H90Y
  • G:L101S
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:G224E
  • G:P230T
  • G:T239A
  • G:S243T
  • G:T245I
  • G:P256Q
  • G:H258Q
  • G:K262E
  • G:I265L

L

  • L:S72T
  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:I1653V
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:N1944S

M

  • M:I159T

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:V352A

NS1

  • NS1:I71V

P

  • P:L55P
  • P:S60P
  • P:T92I
Deletions
N/A
Insertions
N/A

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