PP_006QAY6.1

USA/PP_006QAY6.1/2026-02-15
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-02-15
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-03675

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-19 03:25insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-18
NCBI update date
2026-03-18
Raw reads accession

Host

Host

Submission details

Submission ID
PZ135909.1
Submitting group
Date submitted
2026-03-19 03:25:44 UTC
Date released
2026-03-19 03:33:23 UTC
Earliest release date
2026-03-18

Alignment and QC

Length
15142 (91.7%)
# of SNPs
151
# of inserted bases
6
# of deleted bases
2
# of unknown bases
1178

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A134G
  • A473G
  • G513T
  • G579A
  • C688T
  • T707C
  • G830A
  • A853T
  • T888A
  • C998A
  • G1150A
  • G1385A
  • G1732A
  • A1741G
  • T1846C
  • A1915G
  • C2074T
  • C2198T
Deletions

973, 4586
Insertions

ins_15092:ATATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:I11V
  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:L270P
  • G:S275P
  • G:Y285H

L

  • L:K570R
  • L:G1550D
  • L:R1759K
  • L:V1965I
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS2

  • NS2:E83K
  • NS2:F102Y

P

  • P:T75A
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue