PP_006QAVC.1

USA/PP_006QAVC.1/2026-02-16
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-02-16
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-03673

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-19 03:25insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-18
NCBI update date
2026-03-18
Raw reads accession

Host

Host

Submission details

Submission ID
PZ135907.1
Submitting group
Date submitted
2026-03-19 03:25:44 UTC
Date released
2026-03-19 03:33:23 UTC
Earliest release date
2026-03-18

Alignment and QC

Length
15141 (93.1%)
# of SNPs
134
# of inserted bases
4
# of deleted bases
1
# of unknown bases
963

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T271C
  • T367C
  • T425C
  • C502T
  • G513T
  • G579A
  • G646A
  • T775C
  • C998A
  • A1019G
  • C1068T
  • G1385A
  • C1687T
  • G1732A
  • C1777T
  • T1846C
  • C2074T
  • A2089G
Deletions

973
Insertions

ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:A116V
  • G:T131A
  • G:T136A
  • G:I137T
  • G:Q178R
  • G:P214S
  • G:L217R
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:S305Y

L

  • L:K570R
  • L:V740A
  • L:R1759K
  • L:T1987I

M2-1

  • M2-1:K45R
  • M2-1:S108G

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS1

  • NS1:V72A
  • NS1:L104P
Deletions
N/A
Insertions
N/A

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