PP_006QA3X.1

USA/PP_006QA3X.1/2026-02-05
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-02-05
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-03650

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-19 03:25insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.2

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-18
NCBI update date
2026-03-18
Raw reads accession

Host

Host

Submission details

Submission ID
PZ135884.1
Submitting group
Date submitted
2026-03-19 03:25:44 UTC
Date released
2026-03-19 03:33:23 UTC
Earliest release date
2026-03-18

Alignment and QC

Length
15140 (92.5%)
# of SNPs
145
# of inserted bases
4
# of deleted bases
2
# of unknown bases
1053

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T68C
  • A314G
  • G649A
  • A968G
  • G1028A
  • G1059A
  • G1385A
  • G1732A
  • G1768A
  • T1846C
  • C2074T
  • C2198T
  • G2409A
  • C2554T
  • C2691T
  • C3000T
  • G3036C
  • A3060G
Deletions

973, 4586
Insertions

ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:F12I
  • F:K87R
  • F:S190N
  • F:R209Q
  • F:S211N
  • F:S389P

G

  • G:P110Q
  • G:A116T
  • G:I118T
  • G:T131A
  • G:I137T
  • G:N210D
  • G:P214S
  • G:P221L
  • G:I252T
  • G:T254I
  • G:I268T
  • G:A269V
  • G:T273I
  • G:S275P
  • G:Y285H

L

  • L:V139I
  • L:S169P
  • L:K570R
  • L:I824M
  • L:T1987I
  • L:N2161S

M

  • M:T136A

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F
  • M2-2:T69I

N

  • N:V97I
Deletions
N/A
Insertions
N/A

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