PP_006Q66V.1

USA/PP_006Q66V.1/2026-02-06
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-02-06
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVA-03594

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-19 03:25insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.1.4

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-18
NCBI update date
2026-03-18
Raw reads accession

Host

Host

Submission details

Submission ID
PZ136018.1
Submitting group
Date submitted
2026-03-19 03:25:36 UTC
Date released
2026-03-19 03:33:11 UTC
Earliest release date
2026-03-18

Alignment and QC

Length
15045 (94.3%)
# of SNPs
247
# of deleted bases
2
# of unknown bases
686

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C90T
  • C183T
  • G198A
  • G240A
  • A493G
  • G551A
  • C622T
  • G664A
  • T697C
  • C782T
  • T832C
  • C853T
  • T892C
  • T922C
  • G1000A
  • C1012T
  • A1038G
  • G1042A
Deletions

4592, 15115
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:L3S
  • F:S169N

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:N103T
  • G:T107I
  • G:A122V
  • G:G224V
  • G:V225A
  • G:L226F
  • G:S243I
  • G:K262E
  • G:I265L
  • G:S270P
  • G:Y273H
  • G:D284G
  • G:E286D
  • G:P298S
  • G:V303I

L

  • L:N143D
  • L:D146G
  • L:P171L
  • L:T179S
  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:I1653V
  • L:I1656T
  • L:K1661N
  • L:N1719S
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:G1735D
  • L:I1752M
  • L:V1934I

M

  • M:M43I

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N

N

  • N:V352A

P

  • P:L55P
  • P:I62T
Deletions
N/A
Insertions
N/A

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