PP_0052GM0.1

Argentina/PP_0052GM0.1/2024-07-08
V. Nadalich, D. Acuna, M. Nabaes Jodar, R. Toro, A. Angeletti, A. Cordero, C. Ghiglione, E. De la Rubia, G. Ayala, E. Cobas, L. Delaplace & M. Viegas

National University of La Plata, Buenos Aires, Argentina

Sample details

Collection date
2024-07-08
Sampling location
Argentina

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2026-03-09 13:42doloacuRESTRICTED until 2027-03-09
Data use terms URL

Lineage

Lineage
B.D.E.1.1

Host

Host

Sequencing

Sequencing instrument
MinIon
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Submission details

Submission ID
HRSV/B/Argentina/PAIS-GONNET/48/2024-07-08
Submitting group
Date submitted
2026-03-09 13:42:08 UTC
Date released
2026-03-09 13:42:25 UTC
Earliest release date
2026-03-09

Alignment and QC

Length
15211 (99.9%)
# of SNPs
137

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A276G
  • G332A
  • G513T
  • G579A
  • C628T
  • C998A
  • T1333C
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2092T
  • C2198T
  • C2554T
  • C2691T
  • C2707T
  • G2977A
  • C3000T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I227T
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:K570R
  • L:N590S
  • L:R1759K
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS1

  • NS1:K74E

P

  • P:D225N

SH

  • SH:I49M
Deletions
N/A
Insertions
N/A

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