Argentina/PP_0052FH9.1/2025-09-01
V. Nadalich, D. Acuna, M. Nabaes Jodar, R. Toro, A. Angeletti, A. Cordero, C. Ghiglione, E. De la Rubia, G. Ayala, E. Cobas, L. Delaplace & M. Viegas

National University of La Plata, Buenos Aires, Argentina

Sample details

Collection date
2025-09-01
Sampling location
Argentina

Data use terms

Data use terms
RESTRICTED

Lineage

Lineage
A.D.3.8

Sequencing

Sequencing instrument
MinION
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Submission details

Submission ID
HRSV/A/Argentina/PAIS-GONNET/22/2025-09-01
Date submitted
2026-03-09 13:38:06 UTC
Date released
2026-03-09 13:38:34 UTC
Earliest release date
2026-03-09

Alignment and QC

Length
15192 (93.3%)
# of SNPs
213
# of unknown bases
989

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • C55T
  • T66A
  • A67G
  • C90T
  • C183T
  • T372C
  • G587T
  • C790T
  • C1012T
  • G1034A
  • G1050A
  • G1077A
  • A1197T
  • T1359C
  • T1413A
  • T1422C
  • G1428T
  • A1455G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:T210A
  • G:G224E
  • G:S243I
  • G:H258Q
  • G:Q261R
  • G:K262E
  • G:I265L
  • G:H266L
  • G:D284G
  • G:P298L

L

  • L:P171L
  • L:S240N
  • L:R256K
  • L:L835M
  • L:I1314V
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D

M

  • M:I159T

M2-2

  • M2-2:Y24C

N

  • N:V352A

P

  • P:L55P
  • P:T92M
  • P:S215H

SH

  • SH:V49A
Deletions
N/A
Insertions
N/A

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