PP_0052FGC.1

Argentina/PP_0052FGC.1/2025-08-13
V. Nadalich, D. Acuna, M. Nabaes Jodar, R. Toro, A. Angeletti, A. Cordero, C. Ghiglione, E. De la Rubia, G. Ayala, E. Cobas, L. Delaplace & M. Viegas

National University of La Plata, Buenos Aires, Argentina

Sample details

Collection date
2025-08-13
Sampling location
Argentina

Data use terms

Data use terms
RESTRICTED
Data use terms URL

Lineage

Lineage
A.D.3.7

Host

Host

Sequencing

Sequencing instrument
MinION
Sequencing protocol
Rapid Barcoding Kit; Oxford Nanopore

Submission details

Submission ID
HRSV/A/Argentina/PAIS-GONNET/21/2025-08-13
Submitting group
Date submitted
2026-03-09 13:38:06 UTC
Date released
2026-03-09 13:38:34 UTC
Earliest release date
2026-03-09

Alignment and QC

Length
15225 (91%)
# of SNPs
178
# of unknown bases
1364

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T66A
  • A67G
  • G74A
  • C90T
  • C183T
  • T231C
  • T246C
  • A436G
  • G587T
  • T3909C
  • C3927T
  • C3984T
  • T4002A
  • C4037T
  • C4039T
  • C4079T
  • G4111A
  • T4198G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I

G

  • G:H67N
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:G106R
  • G:T113I
  • G:V131D
  • G:I134K
  • G:R151Q
  • G:N178G
  • G:K221R
  • G:G224E
  • G:S243I
  • G:T252I
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L

L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:H1434P
  • L:L1438Q
  • L:D1644E
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:R2117K

M2-1

  • M2-1:V125I
  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T67A
  • M2-2:T77A

NS1

  • NS1:G2D
  • NS1:T123A
Deletions
N/A
Insertions
N/A

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