PP_00526AZ.1

USA/PP_00526AZ.1/2023-10-18
K. Smith, J. Martinez, H. Yu, C. Umunna, A. Ramaiah, M. Heck & E. Kersh

Georgia Public Health Laboratory, Bioinformatics

Sample details

Collection date
2023-10-18
Sampling location
USA (Georgia)
Isolate name
GPHL-RSV-0075

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-04 03:37insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-03
NCBI update date
2026-03-03
Raw reads accession

Host

Host

Submission details

Submission ID
PZ050443.1
Submitting group
Date submitted
2026-03-04 03:37:17 UTC
Date released
2026-03-04 03:45:12 UTC
Earliest release date
2026-03-03

Alignment and QC

Length
15181 (98.9%)
# of SNPs
116
# of inserted bases
4
# of deleted bases
2
# of ambiguous bases
3
# of unknown bases
114

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G513T
  • C535T
  • G579A
  • C962T
  • C998A
  • T1366C
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • T2721C
  • T3006C
  • G3036C
  • A3060G
  • C3082T
  • T3095C
Deletions

973, 4586
Insertions

ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:I64T
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265L
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:*311Q

L

  • L:P141L
  • L:Q168K
  • L:K570R
  • L:R1759K
  • L:T1987I
  • L:S2076G

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
Deletions
N/A
Insertions
N/A

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