PP_004MNKU.1

Spain/PP_004MNKU.1/2026-01-26
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Raquel Vaz, Maria Carmen Martin, Nieves Larrosa & Andres Anton

Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

Sample details

Collection date
2026-01-26
Sampling location
Spain (Catalonia)

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-02 15:20agonzalezOPEN
Data use terms URL

Lineage

Lineage
A.D.5.2

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Human (Homo sapiens)
Host age
0.3
Host gender
Male

Submission details

Submission ID
hRSV/A/Spain/CT-HUVH-781282/2026
Submitting group
Date submitted
2026-03-02 15:20:28 UTC
Date released
2026-03-04 07:04:23 UTC
Earliest release date
2026-03-04

Alignment and QC

Length
15197 (99.8%)
# of SNPs
252
# of inserted bases
2
# of deleted bases
1
# of unknown bases
2
# of frame shifts
1
Frame shifts
G:258-322(nt:5423-5617)

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • A135T
  • C165T
  • C183T
  • T246C
  • C528T
  • T697C
  • T922C
  • A940C
  • T1004C
  • A1009G
  • A1021G
  • T1028C
  • G1050A
  • A1051C
  • A1078G
Deletions

7515
Insertions

ins_4592:A, ins_5422:A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:A103T
  • F:T122A

G

  • G:A57V
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:I134K
  • G:Q140R
  • G:I141V
  • G:P206Q
  • G:K209R
  • G:K212E
  • G:P215L
  • G:G224E
  • G:K233R
  • G:S243I
  • G:L248I

L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:N1723G
  • L:E1725G
  • L:G1731D
  • L:T1942I
  • L:V1943D

M

  • M:M73L

M2-1

  • M2-1:S176P

M2-2

  • M2-2:S44N

N

  • N:I104V
  • N:V352A

P

  • P:L55P
  • P:T69I
  • P:E239D
Deletions
N/A
Insertions
N/A

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