PP_004MKY5.1

Spain/PP_004MKY5.1/2026-01-13
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Raquel Vaz, Maria Carmen Martin, Nieves Larrosa & Andres Anton

Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

Sample details

Collection date
2026-01-13
Sampling location
Spain (Catalonia)

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-02 15:20agonzalezOPEN
Data use terms URL

Lineage

Lineage
A.D.3.12

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Human (Homo sapiens)
Host age
0.8
Host gender
Male

Submission details

Submission ID
hRSV/A/Spain/CT-HUJO-345031/2025
Submitting group
Date submitted
2026-03-02 15:20:28 UTC
Date released
2026-03-04 07:04:23 UTC
Earliest release date
2026-03-04

Alignment and QC

Length
15192 (99.8%)
# of SNPs
213
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • C183T
  • A357G
  • A400G
  • A563G
  • G587T
  • C686T
  • T975C
  • C1012T
  • C1025A
  • G1034A
  • G1050A
  • G1077A
  • A1341G
  • T1359C
  • G1368A
Deletions

4592
Insertions
N/A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:S276N
  • F:A543T

G

  • G:T42I
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:P126S
  • G:V131D
  • G:I134K
  • G:N178G
  • G:G224E
  • G:T228I
  • G:P230T
  • G:N242D
  • G:S243I
  • G:S250T
  • G:H258Q
  • G:K262E
  • G:I265L

L

  • L:P171L
  • L:A173S
  • L:R256K
  • L:Y598H
  • L:L607I
  • L:L835M
  • L:V878I
  • L:E1190D
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:K1726E
  • L:G1731D
  • L:V2129I

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:V352A

NS1

  • NS1:I111V

P

  • P:L55P
  • P:T72N
  • P:T92M

SH

  • SH:V49I
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue