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PP_004MKDA.1
Download
Download FASTA
Download metadata TSV
Spain/PP_004MKDA.1/2026-01-08
Cristina Andres,
Alejandra Gonzalez Sanchez,
Ignasi Prats,
Karen Garcia Comunas,
Raquel Vaz,
Maria Carmen Martin,
Nieves Larrosa &
Andres Anton
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca
Sample details
Collection date
2026-01-08
Sampling location
Spain (Catalonia)
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-02 15:20
agonzalez
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.1.11
INSDC
INSDC accession
OZ416329.1
BioProject accession
PRJEB91357
BioSample accession
SAMEA121925909
GCA accession
GCA_982198115.1
Host
Host
Human (Homo sapiens)
Host age
0.5
Host gender
Male
Submission details
Submission ID
hRSV/A/Spain/CT-HUAV-345185/2025
Submitting group
Respiratory Virus Unit, Hospital Universitari Vall d'Hebron, Barcelona, Spain
Date submitted
2026-03-02 15:20:28 UTC
Date released
2026-03-04 07:04:23 UTC
Earliest release date
2026-03-04
Alignment and QC
Length
15171 (99.6%)
# of SNPs
233
# of inserted bases
2
# of unknown bases
1
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
T
66
A
A
67
G
C
90
T
C
183
T
G
198
A
A
399
G
C
548
T
G
551
A
G
555
A
T
616
C
T
659
C
G
664
A
T
697
C
A
748
G
G
762
A
T
905
C
G
1000
A
C
1012
T
Show more
Deletions
N/A
Insertions
ins_7586:AC
Amino acid mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
F
F:
V
18
I
F:
V
406
I
F:
A
518
V
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
I
134
K
G:
L
142
S
G:
T
200
A
G:
G
224
E
G:
V
225
A
G:
S
243
I
G:
K
262
E
G:
E
263
G
G:
I
265
L
G:
H
266
Y
G:
P
276
L
G:
D
284
G
G:
Q
285
H
G:
E
295
V
G:
Y
304
H
G:
L
314
P
G:
T
320
A
L
L:
N
143
D
L:
T
153
A
L:
P
171
L
L:
T
179
S
L:
R
256
K
L:
Y
598
H
L:
I
1105
L
L:
L
1438
Q
L:
Y
1590
H
L:
H
1599
R
L:
I
1653
V
L:
K
1661
N
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
S
1789
F
L:
Y
2163
N
M
M:
K
25
R
M:
M
43
I
M2-1
M2-1:
S
176
P
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
M2-2:
I
46
T
N
N:
V
352
A
NS2
NS2:
R
55
K
P
P:
D
33
E
P:
L
55
P
P:
V
73
I
SH
SH:
I
38
S
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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